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  <title>Convert base-32 nucleotide codes to UPAC nucleotide codes</title>
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  <div class="category">
    Format Conversion
  </div>

  <div class="program">
    <a href="combine_fasta.html" onmouseover="self.status='Combines multiple FASTA entries into a single sequence.'; return true;" onmouseout="self.status=' '; return true;">-Combine FASTA</a><br />
    <a href="embl_fasta.html" onmouseover="self.status='Returns the entire sequence contained in an EMBL file in FASTA format.'; return true;" onmouseout="self.status=' '; return true;">-EMBL to FASTA</a><br />
    <a href="embl_feat.html" onmouseover="self.status='Parses the feature table of an EMBL file and returns the feature sequences.'; return true;" onmouseout="self.status=' '; return true;">-EMBL Feature Extractor</a><br />
    <a href="embl_trans.html" onmouseover="self.status='Parses the feature table of an EMBL file and returns the protein translations.'; return true;" onmouseout="self.status=' '; return true;">-EMBL Trans Extractor</a><br />
    <a href="filter_dna.html" onmouseover="self.status='Removes non-DNA characters from text.'; return true;" onmouseout="self.status=' '; return true;">-Filter DNA</a><br />
    <a href="filter_protein.html" onmouseover="self.status='Removes non-protein characters from text.'; return true;" onmouseout="self.status=' '; return true;">-Filter Protein</a><br />
    <a href="genbank_fasta.html" onmouseover="self.status='Returns the entire sequence contained in a GenBank file in FASTA format.'; return true;" onmouseout="self.status=' '; return true;">-GenBank to FASTA</a><br />
    <a href="genbank_feat.html" onmouseover="self.status='Parses the feature table of a GenBank file and returns the feature sequences.'; return true;" onmouseout="self.status=' '; return true;">-GenBank Feature Extractor</a><br />
    <a href="genbank_trans.html" onmouseover="self.status='Parses the feature table of a GenBank file and returns the protein translations.'; return true;" onmouseout="self.status=' '; return true;">-GenBank Trans Extractor</a><br />
    <a href="one_to_three.html" onmouseover="self.status='Converts single letter amino acid codes to three letter codes.'; return true;" onmouseout="self.status=' '; return true;">-One to Three</a><br />
    <a href="range_extract_dna.html" onmouseover="self.status='Reads a list of positions and ranges and returns those parts of a DNA sequence.'; return true;" onmouseout="self.status=' '; return true;">-Range Extractor DNA</a><br />
    <a href="range_extract_protein.html" onmouseover="self.status='Reads a list of positions and ranges and returns those parts of a protein sequence.'; return true;" onmouseout="self.status=' '; return true;">-Range Extractor Protein</a><br />
    <a href="rev_comp.html" onmouseover="self.status='Determines the reverse-complement, reverse, or complement of the sequence you enter.'; return true;" onmouseout="self.status=' '; return true;">-Reverse Complement</a><br />
    <a href="split_codons.html" onmouseover="self.status='Separates bases according to codon position.'; return true;" onmouseout="self.status=' '; return true;">-Split Codons</a><br />
    <a href="split_fasta.html" onmouseover="self.status='Converts a FASTA sequence into multiple sequences.'; return true;" onmouseout="self.status=' '; return true;">-Split FASTA</a><br />
    <a href="three_to_one.html" onmouseover="self.status='Converts three letter amino acid codes to one letter codes.'; return true;" onmouseout="self.status=' '; return true;">-Three to One</a><br />
    <a href="window_extract_dna.html" onmouseover="self.status='Returns DNA sequence segments specified by a position and window size.'; return true;" onmouseout="self.status=' '; return true;">-Window Extractor DNA</a><br />
    <a href="window_extract_protein.html" onmouseover="self.status='Returns protein sequence segments specified by a position and window size.'; return true;" onmouseout="self.status=' '; return true;">-Window Extractor Protein</a><br />
    <a href="to_base_32.html" onmouseover="self.status='Returns a nucleotide sequence in base 32 system'; return true;" onmouseout="self.status=' '; return true;"><b>Convert to base-32</b></a><br />
    <a href="to_iupac_codes.html" onmouseover="self.status='Returns a nucleotide sequence in iupac code system'; return true;" onmouseout="self.status=' '; return true;"><b>Convert to IUPAC</b></a>
  </div>

  <div class="category">
    Sequence Analysis
  </div>

  <div class="program">
    <a href="codon_plot.html" onmouseover="self.status='Plots codon frequency (according to the codon table you enter) for each codon in a DNA sequence.'; return true;" onmouseout="self.status=' '; return true;">-Codon Plot</a><br />
    <a href="codon_usage.html" onmouseover="self.status='Returns a standard codon usage table.'; return true;" onmouseout="self.status=' '; return true;">-Codon Usage</a><br />
    <a href="cpg_islands.html" onmouseover="self.status='Returns a list of potential CpG islands.'; return true;" onmouseout="self.status=' '; return true;">-CpG Islands</a><br />
    <a href="dna_mw.html" onmouseover="self.status='Calculates the molecular weight of DNA sequences.'; return true;" onmouseout="self.status=' '; return true;">-DNA Molecular Weight</a><br />
    <a href="dna_pattern.html" onmouseover="self.status='Returns positions of the patterns you enter.'; return true;" onmouseout="self.status=' '; return true;">-DNA Pattern Find</a><br />
    <a href="dna_stats.html" onmouseover="self.status='Returns basic sequence statistics.'; return true;" onmouseout="self.status=' '; return true;">-DNA Stats</a><br />
    <a href="fuzzy_search_dna.html" onmouseover="self.status='Returns sequences that are identical or similar to a query sequence.'; return true;" onmouseout="self.status=' '; return true;">-Fuzzy Search DNA</a><br />
    <a href="fuzzy_search_protein.html" onmouseover="self.status='Returns sequences that are identical or similar to a query sequence.'; return true;" onmouseout="self.status=' '; return true;">-Fuzzy Search Protein</a><br />
    <a href="ident_sim.html" onmouseover="self.status='Accepts aligned sequences in FASTA format and calculates the identity and similarity of each sequence pair.'; return true;" onmouseout="self.status=' '; return true;">-Ident and Sim</a><br />
    <a href="multi_rev_trans.html" onmouseover="self.status='Can be used to predict a DNA sequence in another species using a protein sequence alignment.'; return true;" onmouseout="self.status=' '; return true;">-Multi Rev Trans</a><br />
    <a href="mutate_for_digest.html" onmouseover="self.status='Finds DNA sequences that can easily be converted to a restriction site.'; return true;" onmouseout="self.status=' '; return true;">-Mutate for Digest</a><br />
    <a href="orf_find.html" onmouseover="self.status='Determines the positions of open reading frames.'; return true;" onmouseout="self.status=' '; return true;">-ORF Finder</a><br />
    <a href="pairwise_align_codons.html" onmouseover="self.status='Returns the optimal global alignment for two coding DNA sequences.'; return true;" onmouseout="self.status=' '; return true;">-Pairwise Align Codons</a><br />
    <a href="pairwise_align_dna.html" onmouseover="self.status='Returns the optimal global alignment for two DNA sequences.'; return true;" onmouseout="self.status=' '; return true;">-Pairwise Align DNA</a><br />
    <a href="pairwise_align_protein.html" onmouseover="self.status='Returns the optimal global alignment for two protein sequences.'; return true;" onmouseout="self.status=' '; return true;">-Pairwise Align Protein</a><br />
    <a href="pcr_primer_stats.html" onmouseover="self.status='Returns a report describing PCR primer properties'; return true;" onmouseout="self.status=' '; return true;">-PCR Primer Stats</a><br />
    <a href="pcr_products.html" onmouseover="self.status='Generates PCR products from a template and two primer sequences.'; return true;" onmouseout="self.status=' '; return true;">-PCR Products</a><br />
    <a href="protein_gravy.html" onmouseover="self.status='Returns the grand average of hydropathy value of protein sequences.'; return true;" onmouseout="self.status=' '; return true;">-Protein GRAVY</a><br />
    <a href="protein_iep.html" onmouseover="self.status='Returns the predicted isoelectric point of protein sequences.'; return true;" onmouseout="self.status=' '; return true;">-Protein Isoelectric Point</a><br />
    <a href="protein_mw.html" onmouseover="self.status='Calculates the molecular weight of protein sequences.'; return true;" onmouseout="self.status=' '; return true;">-Protein Molecular Weight</a><br />
    <a href="protein_pattern.html" onmouseover="self.status='Returns positions of the patterns you enter.'; return true;" onmouseout="self.status=' '; return true;">-Protein Pattern Find</a><br />
    <a href="protein_stats.html" onmouseover="self.status='Returns basic sequence statistics.'; return true;" onmouseout="self.status=' '; return true;">-Protein Stats</a><br />
    <a href="rest_digest.html" onmouseover="self.status='Converts the sequence you enter into restriction fragments.'; return true;" onmouseout="self.status=' '; return true;">-Restriction Digest</a><br />
    <a href="rest_summary.html" onmouseover="self.status='Returns the number and positions of restriction sites.'; return true;" onmouseout="self.status=' '; return true;">-Restriction Summary</a><br />
    <a href="rev_trans.html" onmouseover="self.status='Can be used to convert protein into DNA.'; return true;" onmouseout="self.status=' '; return true;">-Reverse Translate</a><br />
    <a href="translate.html" onmouseover="self.status='Returns the translation in the reading frame you specify.'; return true;" onmouseout="self.status=' '; return true;">-Translate</a>
  </div>

  <div class="category">
    Sequence Figures
  </div>

  <div class="program">
    <a href="color_align_cons.html" onmouseover="self.status='Colors a sequence alignment based on sequence conservation.'; return true;" onmouseout="self.status=' '; return true;">-Color Align Conservation</a><br />
    <a href="color_align_prop.html" onmouseover="self.status='Colors a protein alignment based on biochemical properties of residues.'; return true;" onmouseout="self.status=' '; return true;">-Color Align Properties</a><br />
    <a href="group_dna.html" onmouseover="self.status='Numbers and groups DNA according to your specifications.'; return true;" onmouseout="self.status=' '; return true;">-Group DNA</a><br />
    <a href="group_protein.html" onmouseover="self.status='Numbers and groups amino acids according to your specifications.'; return true;" onmouseout="self.status=' '; return true;">-Group Protein</a><br />
    <a href="primer_map.html" onmouseover="self.status='Shows PCR primer annealing sites, translations, and restriction sites.'; return true;" onmouseout="self.status=' '; return true;">-Primer Map</a><br />
    <a href="rest_map.html" onmouseover="self.status='Shows restriction sites and protein translations.'; return true;" onmouseout="self.status=' '; return true;">-Restriction Map</a><br />
    <a href="trans_map.html" onmouseover="self.status='Shows protein translations.'; return true;" onmouseout="self.status=' '; return true;">-Translation Map</a>
  </div>

  <div class="category">
    Random Sequences
  </div>

  <div class="program">
    <a href="mutate_dna.html" onmouseover="self.status='Introduces random mutations into DNA sequences.'; return true;" onmouseout="self.status=' '; return true;">-Mutate DNA</a><br />
    <a href="mutate_protein.html" onmouseover="self.status='Introduces random mutations into protein sequences.'; return true;" onmouseout="self.status=' '; return true;">-Mutate Protein</a><br />
    <a href="random_coding_dna.html" onmouseover="self.status='Generates a random coding sequence of the length you specify.'; return true;" onmouseout="self.status=' '; return true;">-Random Coding DNA</a><br />
    <a href="random_dna.html" onmouseover="self.status='Generates a random DNA sequence of the length you specify.'; return true;" onmouseout="self.status=' '; return true;">-Random DNA Sequence</a><br />
    <a href="random_dna_regions.html" onmouseover="self.status='Replaces regions of the DNA sequences you enter with random bases.'; return true;" onmouseout="self.status=' '; return true;">-Random DNA Regions</a><br />
    <a href="random_protein.html" onmouseover="self.status='Generates a random protein sequence of the length you specify.'; return true;" onmouseout="self.status=' '; return true;">-Random Protein Sequence</a><br />
    <a href="random_protein_regions.html" onmouseover="self.status='Replaces regions of the protein sequences you enter with random residues.'; return true;" onmouseout="self.status=' '; return true;">-Random Protein Regions</a><br />
    <a href="sample_dna.html" onmouseover="self.status='Samples bases from a DNA sequence with replacement.'; return true;" onmouseout="self.status=' '; return true;">-Sample DNA</a><br />
    <a href="sample_protein.html" onmouseover="self.status='Samples residues from a protein sequence with replacement.'; return true;" onmouseout="self.status=' '; return true;">-Sample Protein</a><br />
    <a href="shuffle_dna.html" onmouseover="self.status='Randomly shuffles the DNA sequences you enter.'; return true;" onmouseout="self.status=' '; return true;">-Shuffle DNA</a><br />
    <a href="shuffle_protein.html" onmouseover="self.status='Randomly shuffles the protein sequences you enter.'; return true;" onmouseout="self.status=' '; return true;">-Shuffle Protein</a>
  </div>

  <div class="category">
    Miscellaneous
  </div>

  <div class="program">
    <a href="iupac.html" onmouseover="self.status='IUPAC codes for DNA and protein.'; return true;" onmouseout="self.status=' '; return true;">-IUPAC codes</a><br />
    <a href="genetic_code.html" onmouseover="self.status='The genetic codes used in the Sequence Manipulation Suite.'; return true;" onmouseout="self.status=' '; return true;">-Genetic codes</a><br />
    <a href="browser_compat.html" onmouseover="self.status='Browser compatibility.'; return true;" onmouseout="self.status=' '; return true;">-Browser compatibility</a><br />
    <a href="mirror.html" onmouseover="self.status='Mirror the Sequence Manipulation Suite.'; return true;" onmouseout="self.status=' '; return true;">-Mirror this site</a><br />
    <a href="mirror.html" onmouseover="self.status='Use the Sequence Manipulation Suite off-line.'; return true;" onmouseout="self.status=' '; return true;">-Use this site off-line</a><br />
    <a href="about.html" onmouseover="self.status='About the Sequence Manipulation Suite.'; return true;" onmouseout="self.status=' '; return true;">-About this site</a><br />
    <a href="acknowledgments.html" onmouseover="self.status='Acknowledgments.'; return true;" onmouseout="self.status=' '; return true;">-Acknowledgments</a><br />
    <a href="reference.html" onmouseover="self.status='Citing the Sequence Manipulation Suite.'; return true;" onmouseout="self.status=' '; return true;">-Reference</a>
    <a href="acknowledgments.html" onmouseover="self.status='Acknowledgments.'; return true;" onmouseout="self.status=' '; return true;">-Acknowledgments</a><br />
    <a href="reference.html" onmouseover="self.status='Citing the Sequence Manipulation Suite.'; return true;" onmouseout="self.status=' '; return true;">-Reference</a>


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            The Sequence Manipulation Suite Copyright &copy; 2000, 2004 Paul Stothard. Send questions and comments to stothard@ualberta.ca
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                <td class="sms">Sequence Manipulation Suite:</td>
              </tr>

              <tr>
                <td class="title">Convert the base-32 nucleotide codes to IUPAC codes</td>
              </tr>

              <tr>
                <td class="description">
                  This application converts the base-32 nucleotide codes to IUPAC codes.The base-32 nucleotide codes are proposed by Liu T.-K.(unpublished). If you are interested in the paper please send and email to tanklao(at)gmail.com or tliu(at)niu.edu. Nucleotides with ambiguity were treated as 'X'. The sample sequence was a part of the consensus sequence generated from insulin cDNAs of human, chimpanzee, dog, rat, pig and chicken.<br />
                  <br />

                  <form action="" name="main_form" id="main_form">
                    Paste the text into the text area below. Input limit is 500000 characters.<br />
                    <textarea rows="6" cols="80">
18442a2868441a6243aa328422a28b2844ae28828e4a2a8a86c47722a577
32f562e7d82bcaa4ae11321521228e84a44aa2b212a8448641542e246812
28548288a44541524b44a88288281292722a115d2224b34c41d4a7414716
2ae2954a576f77f6a6e942ee46a4554ppjjwmnynb74476ntj8c29472aa86

</textarea><br />
                    <div class="warning">
                      Please check the <a href="browser_compat.html">browser compatibility</a> page before using this program.
                    </div><input type="button" value="Submit" name="main_submit" onclick="try{Base32CodesToIUPACCodes(document)} catch(e) {alert('The following error was encountered: ' + e);}" /> <input type="button" value="Clear" onclick="document.forms[0].elements[0].value = ' '" /> <input type="reset" value="Reset" />
                  </form>*This page requires JavaScript. See <a href="browser_compat.html">browser compatibility.</a><br />
                  *You can <a href="mirror.html">mirror this page</a> or <a href="mirror.html">use it off-line</a>.<br />
                  <br />
<tr><br />
<TABLE WIDTH=894 BORDER=1 BORDERCOLOR="#000000" CELLPADDING=4 CELLSPACING=0>
	<COL WIDTH=36>
	<COL WIDTH=83>
	<COL WIDTH=67>
	<COL WIDTH=93>
	<COL WIDTH=49>
	<COL WIDTH=119>
	<COL WIDTH=27>
	<COL WIDTH=44>
	<COL WIDTH=84>
	<COL WIDTH=97>
	<COL WIDTH=105>
	<TR VALIGN=TOP>
		<TD WIDTH=36>
			<P>Value 
			</P>
		</TD>
		<TD WIDTH=83>
			<P>Encode Digit 
			</P>
		</TD>
		<TD WIDTH=67>
			<P>Terms*</P>
		</TD>
		<TD WIDTH=93>
			<P>Meaning</P>
		</TD>
		<TD WIDTH=49>
			<P>IUPAC code</P>
		</TD>
		<TD WIDTH=119>
			<P>Note</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44>
			<P>Value 
			</P>
		</TD>
		<TD WIDTH=84>
			<P>Encode Digit 
			</P>
		</TD>
		<TD WIDTH=97>
			<P>Terms*</P>
		</TD>
		<TD WIDTH=105>
			<P>Meaning
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="1" SDNUM="1033;">
			<P>1</P>
		</TD>
		<TD WIDTH=83 SDVAL="1" SDNUM="1033;">
			<P>1</P>
		</TD>
		<TD WIDTH=67 SDVAL="1" SDNUM="1033;">
			<P>1</P>
		</TD>
		<TD WIDTH=93>
			<P>A</P>
		</TD>
		<TD WIDTH=49>
			<P>A</P>
		</TD>
		<TD WIDTH=119>
			<P>Adenine</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="17" SDNUM="1033;">
			<P>17</P>
		</TD>
		<TD WIDTH=84>
			<P>h</P>
		</TD>
		<TD WIDTH=97>
			<P>16+1</P>
		</TD>
		<TD WIDTH=105>
			<P>- or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="2" SDNUM="1033;">
			<P>2</P>
		</TD>
		<TD WIDTH=83 SDVAL="2" SDNUM="1033;">
			<P>2</P>
		</TD>
		<TD WIDTH=67 SDVAL="2" SDNUM="1033;">
			<P>2</P>
		</TD>
		<TD WIDTH=93>
			<P>C</P>
		</TD>
		<TD WIDTH=49>
			<P>C</P>
		</TD>
		<TD WIDTH=119>
			<P>Cytosine</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="18" SDNUM="1033;">
			<P>18</P>
		</TD>
		<TD WIDTH=84>
			<P>j</P>
		</TD>
		<TD WIDTH=97>
			<P>16+2</P>
		</TD>
		<TD WIDTH=105>
			<P>- or C
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="3" SDNUM="1033;">
			<P>3</P>
		</TD>
		<TD WIDTH=83 SDVAL="3" SDNUM="1033;">
			<P>3</P>
		</TD>
		<TD WIDTH=67>
			<P>2+1</P>
		</TD>
		<TD WIDTH=93>
			<P>C or A</P>
		</TD>
		<TD WIDTH=49>
			<P>M</P>
		</TD>
		<TD WIDTH=119>
			<P>aMino</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="19" SDNUM="1033;">
			<P>19</P>
		</TD>
		<TD WIDTH=84>
			<P>k</P>
		</TD>
		<TD WIDTH=97>
			<P>16+2+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, C or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="4" SDNUM="1033;">
			<P>4</P>
		</TD>
		<TD WIDTH=83 SDVAL="4" SDNUM="1033;">
			<P>4</P>
		</TD>
		<TD WIDTH=67 SDVAL="4" SDNUM="1033;">
			<P>4</P>
		</TD>
		<TD WIDTH=93>
			<P>G</P>
		</TD>
		<TD WIDTH=49>
			<P>G</P>
		</TD>
		<TD WIDTH=119>
			<P>Guanine</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="20" SDNUM="1033;">
			<P>20</P>
		</TD>
		<TD WIDTH=84>
			<P>m</P>
		</TD>
		<TD WIDTH=97>
			<P>16+4</P>
		</TD>
		<TD WIDTH=105>
			<P>- or G
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="5" SDNUM="1033;">
			<P>5</P>
		</TD>
		<TD WIDTH=83 SDVAL="5" SDNUM="1033;">
			<P>5</P>
		</TD>
		<TD WIDTH=67>
			<P>4+1</P>
		</TD>
		<TD WIDTH=93>
			<P>G or A</P>
		</TD>
		<TD WIDTH=49>
			<P>R</P>
		</TD>
		<TD WIDTH=119>
			<P>puRine</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="21" SDNUM="1033;">
			<P>21</P>
		</TD>
		<TD WIDTH=84>
			<P>n</P>
		</TD>
		<TD WIDTH=97>
			<P>16+4+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, G or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="6" SDNUM="1033;">
			<P>6</P>
		</TD>
		<TD WIDTH=83 SDVAL="6" SDNUM="1033;">
			<P>6</P>
		</TD>
		<TD WIDTH=67>
			<P>4+2</P>
		</TD>
		<TD WIDTH=93>
			<P>G or C</P>
		</TD>
		<TD WIDTH=49>
			<P>S</P>
		</TD>
		<TD WIDTH=119>
			<P>Strong 
			</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="22" SDNUM="1033;">
			<P>22</P>
		</TD>
		<TD WIDTH=84>
			<P>p</P>
		</TD>
		<TD WIDTH=97>
			<P>16+4+2</P>
		</TD>
		<TD WIDTH=105>
			<P>-, G or C
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="7" SDNUM="1033;">
			<P>7</P>
		</TD>
		<TD WIDTH=83 SDVAL="7" SDNUM="1033;">
			<P>7</P>
		</TD>
		<TD WIDTH=67>
			<P>4+2+1</P>
		</TD>
		<TD WIDTH=93>
			<P>G, C or A</P>
		</TD>
		<TD WIDTH=49>
			<P>V</P>
		</TD>
		<TD WIDTH=119>
			<P>not T (U)</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="23" SDNUM="1033;">
			<P>23</P>
		</TD>
		<TD WIDTH=84>
			<P>q</P>
		</TD>
		<TD WIDTH=97>
			<P>16+4+2+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, G, C or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="8" SDNUM="1033;">
			<P>8</P>
		</TD>
		<TD WIDTH=83 SDVAL="8" SDNUM="1033;">
			<P>8</P>
		</TD>
		<TD WIDTH=67 SDVAL="8" SDNUM="1033;">
			<P>8</P>
		</TD>
		<TD WIDTH=93>
			<P>T</P>
		</TD>
		<TD WIDTH=49>
			<P>T</P>
		</TD>
		<TD WIDTH=119>
			<P>Thymine or Uracil</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="24" SDNUM="1033;">
			<P>24</P>
		</TD>
		<TD WIDTH=84>
			<P>r</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8</P>
		</TD>
		<TD WIDTH=105>
			<P>- or T
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="9" SDNUM="1033;">
			<P>9</P>
		</TD>
		<TD WIDTH=83 SDVAL="9" SDNUM="1033;">
			<P>9</P>
		</TD>
		<TD WIDTH=67>
			<P>8+1</P>
		</TD>
		<TD WIDTH=93>
			<P>T or A</P>
		</TD>
		<TD WIDTH=49>
			<P>W</P>
		</TD>
		<TD WIDTH=119>
			<P>Weak 
			</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="25" SDNUM="1033;">
			<P>25</P>
		</TD>
		<TD WIDTH=84>
			<P>s</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="10" SDNUM="1033;">
			<P>10</P>
		</TD>
		<TD WIDTH=83>
			<P>a</P>
		</TD>
		<TD WIDTH=67>
			<P>8+2</P>
		</TD>
		<TD WIDTH=93>
			<P>T or C</P>
		</TD>
		<TD WIDTH=49>
			<P>Y</P>
		</TD>
		<TD WIDTH=119>
			<P>pYrimidine</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="26" SDNUM="1033;">
			<P>26</P>
		</TD>
		<TD WIDTH=84>
			<P>t</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+2</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T or C
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="11" SDNUM="1033;">
			<P>11</P>
		</TD>
		<TD WIDTH=83>
			<P>b</P>
		</TD>
		<TD WIDTH=67>
			<P>8+2+1</P>
		</TD>
		<TD WIDTH=93>
			<P>T, C or A</P>
		</TD>
		<TD WIDTH=49>
			<P>H</P>
		</TD>
		<TD WIDTH=119>
			<P>not G</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="27" SDNUM="1033;">
			<P>27</P>
		</TD>
		<TD WIDTH=84>
			<P>v</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+2+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T, C or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="12" SDNUM="1033;">
			<P>12</P>
		</TD>
		<TD WIDTH=83>
			<P>c</P>
		</TD>
		<TD WIDTH=67>
			<P>8+4</P>
		</TD>
		<TD WIDTH=93>
			<P>T or G</P>
		</TD>
		<TD WIDTH=49>
			<P>K</P>
		</TD>
		<TD WIDTH=119>
			<P>Keto</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="28" SDNUM="1033;">
			<P>28</P>
		</TD>
		<TD WIDTH=84>
			<P>w</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+4</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T or G
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="13" SDNUM="1033;">
			<P>13</P>
		</TD>
		<TD WIDTH=83>
			<P>d</P>
		</TD>
		<TD WIDTH=67>
			<P>8+4+1</P>
		</TD>
		<TD WIDTH=93>
			<P>T, G or A</P>
		</TD>
		<TD WIDTH=49>
			<P>D</P>
		</TD>
		<TD WIDTH=119>
			<P>not C</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="29" SDNUM="1033;">
			<P>29</P>
		</TD>
		<TD WIDTH=84>
			<P>x</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+4+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T, G or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="14" SDNUM="1033;">
			<P>14</P>
		</TD>
		<TD WIDTH=83>
			<P>e</P>
		</TD>
		<TD WIDTH=67>
			<P>8+4+2</P>
		</TD>
		<TD WIDTH=93>
			<P>T, G or C</P>
		</TD>
		<TD WIDTH=49>
			<P>B</P>
		</TD>
		<TD WIDTH=119>
			<P>not A</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="30" SDNUM="1033;">
			<P>30</P>
		</TD>
		<TD WIDTH=84>
			<P>y</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+4+2</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T, G or C
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="15" SDNUM="1033;">
			<P>15</P>
		</TD>
		<TD WIDTH=83>
			<P>f</P>
		</TD>
		<TD WIDTH=67>
			<P>8+4+2+1</P>
		</TD>
		<TD WIDTH=93>
			<P>T, G, C or A</P>
		</TD>
		<TD WIDTH=49>
			<P>N</P>
		</TD>
		<TD WIDTH=119>
			<P>aNy nucleotide</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="31" SDNUM="1033;">
			<P>31</P>
		</TD>
		<TD WIDTH=84>
			<P>z</P>
		</TD>
		<TD WIDTH=97>
			<P>16+8+4+2+1</P>
		</TD>
		<TD WIDTH=105>
			<P>-, T, G, C or A
</P>
		</TD>
	</TR>
	<TR VALIGN=TOP>
		<TD WIDTH=36 SDVAL="16" SDNUM="1033;">
			<P>16</P>
		</TD>
		<TD WIDTH=83>
			<P>g</P>
		</TD>
		<TD WIDTH=67 SDVAL="16" SDNUM="1033;">
			<P>16</P>
		</TD>
		<TD WIDTH=93>
			<P>gap</P>
		</TD>
		<TD WIDTH=49>
			<P>-</P>
		</TD>
		<TD WIDTH=119>
			<P>gap</P>
		</TD>
		<TD WIDTH=27>
			<P><BR>
			</P>
		</TD>
		<TD WIDTH=44 SDVAL="0" SDNUM="1033;">
			<P>0</P>
		</TD>
		<TD WIDTH=84 SDVAL="0" SDNUM="1033;">
			<P>0</P>
		</TD>
		<TD WIDTH=97 SDVAL="0" SDNUM="1033;">
			<P>0</P>
		</TD>
		<TD WIDTH=105>
			<P>any other cases
</P>
		</TD>
	</TR>
</TABLE>
              <p>
               The Sequence Manipulation Suite Copyright &copy; 2000, 2004 Paul (stothard@ualberta.ca).<br />And this application was developmented by Ting-Kai Liu under GNU General Public License. <br />If you have questions, comments and advise,please don't hesitate to contact the author at tankao(at)gmail.com or tliu(at)niu.edu.
              </p>

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